Results:
I categorised them into three groups based on evidence of selection in the metastasis. “Selected” frequencies were compared to “not selected”. Significance was calculated by comparing event selection proportions, to null background mutation rates.
AIHLA was significantly associated with metastasis, suggesting AIHLA contributes to metastasis (p=0.002). Immunohistochemical analysis on 897 tumour biopsies stained for the proliferation marker Ki67 showed increased proliferative potential in AIHLA-positive versus AIHLA-negative biopsies.
Discussion:
These results suggest escape from immune predation represents a significant constraint to tumour evolution and AIHLA could facilitate evasion, thereby contributing to metastasis. An investigation of the HLA alleles lost may help determine which neoantigens will elicit an effective immune response and so could be exploited by personalised immunotherapies.